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Peptide record

TPDB14023

Antibacterial standard
188 amino acids
Basic Information
3D PDB MODEL
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TPDB14023
Antibacterial
Anti-infective peptides
dbAMP
standard
No
A 188-aa standard natural antibacterial peptide sequence curated from dbAMP, with an available 3D structural model.
Sequence
DAHGALTLNSDGTSGAVVKVPFAGNDKNIVSAIGSVDLTDRQKLGAATAGVALDNINGHGLSLTDTHIPGFGDKMTAAGKVNVFHNDNHDITAKAFATRNMPDIANVPNFNTVGGGIDYMFKDKIGASASAAHTDFINRNDYSLDGKLNLFKTPDTSIDFNAGFKKFDTPFMKSSWEPNFGFSLSKYF
Physicochemical Analysis
C889H1358N242O277S4
C
A
19996.26
6.04
23
20
74
-2
27.65
-0.264
69.63
Mammalian: 1.1 hour Yeast: 3 min E.coli: >10 hour
9970
49.86
48
Residue Composition
number
20
A
3
R
17
N
19
D
0
C
1
E
1
Q
19
G
6
H
10
I
11
L
14
K
4
M
15
F
7
P
13
S
14
T
1
W
3
Y
10
V
Amino Acid Distribution
A: 20 R: 3 N: 17 D: 19 C: 0 E: 1 Q: 1 G: 19 H: 6 I: 10 L: 11 K: 14 M: 4 F: 15 P: 7 S: 13 T: 14 W: 1 Y: 3 V: 10
Chemical Descriptors
188
C889H1358N242O277S4
19996.26
6.04
-2
27.65
-0.264
Evidence Records 1 records
Evidence 1 Activity

Activity

Antibacterial

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antibacterial
dbAMP classified as Antibacterial under the Anti-bacterial function class.
lethal concentration =LC: Active against E. coli D21 or D22 (LC 0.3-2 uM), P. maltophilia Pm1 (LC 15 uM), A. calcoacetcus (LC 1 uM), E-cloacae (LC >20 uM), and B-megaterium (LC >20 uM). Warning: other bacteria not tested.