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Peptide record

TPDB13998

Antibacterial Anticancer Antifungal Antiparasitic standard
51 amino acids
Basic Information
3D PDB MODEL
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TPDB13998
Antibacterial Anticancer Antifungal Antiparasitic
Anti-infective peptides Cancer-related peptides
dbAMP DRAMP Peptipedia AFP-GFuse Antifp
standard
No
A 51-aa standard-residue multi-activity (Antibacterial, Anticancer, Antifungal, and other sources) peptide sequence curated from dbAMP, DRAMP, Peptipedia, and other sources, with an available 3D structural model.
Sequence
AVGSLKSIGYEAELDHCHTNGGYCVRAICPPSARRPGSCFPEKNPCCKYMK
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C237H372N70O70S7
QW
C
5546.41
8.30
9
4
15
+3
1.62
-0.439
49.80
Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour
4845
0.87
16
Residue Composition
number
4
A
3
R
2
N
1
D
6
C
3
E
0
Q
5
G
2
H
2
I
2
L
4
K
1
M
1
F
5
P
4
S
1
T
0
W
3
Y
2
V
Amino Acid Distribution
A: 4 R: 3 N: 2 D: 1 C: 6 E: 3 Q: 0 G: 5 H: 2 I: 2 L: 2 K: 4 M: 1 F: 1 P: 5 S: 4 T: 1 W: 0 Y: 3 V: 2
Chemical Descriptors
51 reviewed residue count
C237H372N70O70S7 sequence-only estimate (linear, free termini)
5546.41 sequence-only estimate (linear, free termini)
8.30 sequence-only estimate (linear, free termini)
+3 sequence-only estimate (linear, free termini)
1.62 sequence-only estimate (linear, free termini)
-0.439 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP DRAMP