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Peptide record

TPDB13993

Antibacterial standard
177 amino acids
Basic Information
3D PDB MODEL
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TPDB13993
Antibacterial
Anti-infective peptides
dbAMP
standard
No
A 177-aa standard natural antibacterial peptide sequence curated from dbAMP, with an available 3D structural model.
Sequence
AVDFGEAIWNPASSSNYSTASNQTSAVIMHTMEGSYAGSISWFQNPSAQVSAHYLIRKSDGQITQMVREYHQAWHAKNHNYYTIGIEHDGRAADAGNWSAAMVNASARLTKSICARRGVNCASAWKGPGYDTFHLVPDSVRVKGHGMLSGNENRYDPGKYFPWSNYYNLINGGGGNP
Physicochemical Analysis
C852H1266N250O260S7
A
19395.36
8.69
22
12
69
+3
19.42
-0.563
56.89
Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour
49515
255.29
60
Residue Composition
number
20
A
8
R
15
N
7
D
2
C
5
E
6
Q
18
G
8
H
9
I
5
L
6
K
5
M
4
F
7
P
19
S
7
T
6
W
11
Y
9
V
Amino Acid Distribution
A: 20 R: 8 N: 15 D: 7 C: 2 E: 5 Q: 6 G: 18 H: 8 I: 9 L: 5 K: 6 M: 5 F: 4 P: 7 S: 19 T: 7 W: 6 Y: 11 V: 9
Chemical Descriptors
177
C852H1266N250O260S7
19395.36
8.69
+3
19.42
-0.563
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antibacterial
dbAMP classified as Antibacterial under the Anti-bacterial function class.