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Peptide record

TPDB13965

Antibacterial standard
689 amino acids
Basic Information
3D PDB MODEL
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TPDB13965
Antibacterial
Anti-infective peptides
dbAMP
standard
No
A 689-aa standard natural antibacterial peptide sequence curated from dbAMP, with an available 3D structural model.
Sequence
APRKNVRWCTISQPEWFKCRRWQWRMKKLGAPSITCVRRAFALECIRAIAEKKADAVTLDGGMVFEAGRDPYKLRPVAAEIYGTKESPQTHYYAVAVVKKGSNFQLDQLQGRKSCHTGLGRSAGWIIPMGILRPYLSWTESLEPLQGAVAKFFSASCVPCIDRQAYPNLCQLCKGEGENQCACSSREPYFGYSGAFKCLQDGAGDVAFVKETTVFENLPEKADRDQYELLCLNNSRAPVDAFKECHLAQVPSHAVVARSVDGKEDLIWKLLSKAQEKFGKNKSRSFQLFGSPPGQRDLLFKDSALGFLRIPSKVDSALYLGSRYLTTLKNLRETAEEVKARYTRVVWCAVGPEEQKKCQQWSQQSGQNVTCATASTTDDCIVLVLKGEADALNLDGGYIYTAGKCGLVPVLAENRKSSKHSSLDCVLRPTEGYLAVAVVKKANEGLTWNSLKDKKSCHTAVDRTAGWNIPMGLIVNQTGSCAFDEFFSQSCAPGADPKSRLCALCAGDDQGLDKCVPNSKEKYYGYTGAFRCLAEDVGDVAFVKNDTVWENTNGESTADWAKNLNREDFRLLCLDGTRKPVTEAQSCHLAVAPNHAVVSRSDRAAHVKQVLLHQQALFGKNGKNCPDKFCLFKSETKNLLFNDNTECLAKLGGRPTYEEYLGTEYVTAIANLKKCSTSPLLEACAFLTR
Physicochemical Analysis
C3358H5283N945O1002S38
A
76143.90
8.20
101
76
260
+14
138.52
-0.350
75.50
Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour
104915
137.79
194
Residue Composition
number
67
A
37
R
29
N
36
D
34
C
40
E
29
Q
49
G
10
H
16
I
66
L
54
K
4
M
27
F
30
P
45
S
36
T
13
W
21
Y
46
V
Amino Acid Distribution
A: 67 R: 37 N: 29 D: 36 C: 34 E: 40 Q: 29 G: 49 H: 10 I: 16 L: 66 K: 54 M: 4 F: 27 P: 30 S: 45 T: 36 W: 13 Y: 21 V: 46
Chemical Descriptors
689
C3358H5283N945O1002S38
76143.90
8.20
+14
138.52
-0.350
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antibacterial
dbAMP classified as Antibacterial under the Anti-bacterial function class.