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Peptide record

TPDB13963

Antibacterial Anticancer Antifungal Antiparasitic standard
62 amino acids
Basic Information
3D PDB MODEL
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TPDB13963
Antibacterial Anticancer Antifungal Antiparasitic
Anti-infective peptides Cancer-related peptides
dbAMP DRAMP Peptipedia Antifp
standard
No
A 62-aa standard-residue multi-activity (Antibacterial, Anticancer, Antifungal, and other sources) peptide sequence curated from dbAMP, DRAMP, Peptipedia, and other sources, with an available 3D structural model.
Sequence
APQMKTRDVLERTHKCFLVGGECKSECSSWEYEYVFCYTGPCCVMREYKRVEKFSNTPKYTT
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C322H491N85O96S8
I
E
7345.43
8.01
11
8
19
+2
2.22
-0.690
37.58
Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour
13325
1.81
23
Residue Composition
number
1
A
4
R
1
N
1
D
6
C
7
E
1
Q
3
G
1
H
0
I
2
L
6
K
2
M
3
F
3
P
4
S
6
T
1
W
5
Y
5
V
Amino Acid Distribution
A: 1 R: 4 N: 1 D: 1 C: 6 E: 7 Q: 1 G: 3 H: 1 I: 0 L: 2 K: 6 M: 2 F: 3 P: 3 S: 4 T: 6 W: 1 Y: 5 V: 5
Chemical Descriptors
62 reviewed residue count
C322H491N85O96S8 sequence-only estimate (linear, free termini)
7345.43 sequence-only estimate (linear, free termini)
8.01 sequence-only estimate (linear, free termini)
+2 sequence-only estimate (linear, free termini)
2.22 sequence-only estimate (linear, free termini)
-0.690 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP DRAMP