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Peptide record

TPDB13958

Antibacterial standard
486 amino acids
Basic Information
3D PDB MODEL
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TPDB13958
Antibacterial
Anti-infective peptides
dbAMP
standard
No
A 486-aa standard natural antibacterial peptide sequence curated from dbAMP, with an available 3D structural model.
Sequence
ANDRNPLEECFRETDYEEFLEIARNGLKATSNPKHVVVVGAGMSGLSAAYVLSGAGHQVTVLEASERAGGRVRTYRNDKEDWYANLGPMRLPEKHRIVREYIRKFGLQLNEFSQENDNAWYFIKNIRKRVGEVKKDPGVLKYPVKPSEEGKSAGQLYEESLGKVVEELKRTNCSYILNKYDTYSTKEYLLKEGNLSPGAVDMIGDLMNEDSGYYVSFPESLRHDDIFAYEKRFDEIVGGMDKLPTSMYRAIEEKVHLNAQVIKIQKNAEKVTVVYQTPAKEMASVTADYVIVCTTSRATRRIKFEPPLPPKKAHALRSVHYRSGTKIFLTCTKKFWEDEGIHGGKSTTDLPSRFIYYPNHNFTSGVGVIIAYGIGDDANFFQALDFKDCADIVINDLSLIHQLPREEIQTFCYPSMIQKWSLDKYAMGGITTFTPYQFQHFSESLTASVDRIYFAGEHTAEAHGWIDSTIKSGLRAARDVNRASEQ
Physicochemical Analysis
C2463H3815N671O739S15
E
55131.34
6.55
76
66
190
-2
123.91
-0.498
76.05
Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour
66615
120.83
126
Residue Composition
number
35
A
28
R
21
N
27
D
6
C
39
E
14
Q
34
G
13
H
29
I
33
L
35
K
9
M
21
F
20
P
32
S
27
T
5
W
26
Y
32
V
Amino Acid Distribution
A: 35 R: 28 N: 21 D: 27 C: 6 E: 39 Q: 14 G: 34 H: 13 I: 29 L: 33 K: 35 M: 9 F: 21 P: 20 S: 32 T: 27 W: 5 Y: 26 V: 32
Chemical Descriptors
486
C2463H3815N671O739S15
55131.34
6.55
-2
123.91
-0.498
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antibacterial
dbAMP classified as Antibacterial under the Anti-bacterial function class.