Back to search

Peptide record

TPDB13878

Antibacterial standard
122 amino acids
Basic Information
3D PDB MODEL
Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.
TPDB13878
Antibacterial
Anti-infective peptides
dbAMP Peptipedia
standard
No
A 122-aa standard natural antibacterial peptide sequence curated from dbAMP and Peptipedia, with an available 3D structural model.
Sequence
AAKNKKEKGKKGASDCTEWTWGSCIPNSKDCGAGTREGTCKEETRKLKCKIPCNWKKAFGADCKYKFENWGECNATTGQKVRSGTLKKALYNADCQQTVEATKPCSLKTKSKSKGKKGKGKE
Physicochemical Analysis
C572H937N171O178S10
HM
K
13378.37
9.93
30
13
26
+17
42.09
-1.181
32.13
Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour
25605
191.39
39
Residue Composition
number
10
A
3
R
6
N
4
D
10
C
9
E
3
Q
13
G
0
H
2
I
4
L
27
K
0
M
2
F
3
P
7
S
11
T
4
W
2
Y
2
V
Amino Acid Distribution
A: 10 R: 3 N: 6 D: 4 C: 10 E: 9 Q: 3 G: 13 H: 0 I: 2 L: 4 K: 27 M: 0 F: 2 P: 3 S: 7 T: 11 W: 4 Y: 2 V: 2
Chemical Descriptors
122
C572H937N171O178S10
13378.37
9.93
+17
42.09
-1.181
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antibacterial
dbAMP classified as Antibacterial under the Anti-bacterial function class.