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Peptide record

TPDB13877

Antibacterial Anticancer Antifungal Antiparasitic standard
87 amino acids
Basic Information
3D PDB MODEL
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TPDB13877
Antibacterial Anticancer Antifungal Antiparasitic
Anti-infective peptides Cancer-related peptides
dbAMP Peptipedia
standard
No
A 87-aa standard-residue multi-activity (Antibacterial, Anticancer, Antifungal, and other sources) peptide sequence curated from dbAMP and Peptipedia, with an available 3D structural model.
Sequence
AAGNPSETGGAVATYSTAVGSFLDGTVKVVATGGASRVPGNCGTAAVLECDNPESFDGTRAWGDLSADQGTGEDAPPETASLIFAVN
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C361H560N100O132S2
HM
A
8477.13
3.60
3
11
32
-8
1.06
-0.049
65.17
Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour
7115
0.84
24
Residue Composition
number
14
A
2
R
4
N
6
D
2
C
5
E
1
Q
13
G
0
H
1
I
4
L
1
K
0
M
3
F
5
P
7
S
9
T
1
W
1
Y
8
V
Amino Acid Distribution
A: 14 R: 2 N: 4 D: 6 C: 2 E: 5 Q: 1 G: 13 H: 0 I: 1 L: 4 K: 1 M: 0 F: 3 P: 5 S: 7 T: 9 W: 1 Y: 1 V: 8
Chemical Descriptors
87 reviewed residue count
C361H560N100O132S2 sequence-only estimate (linear, free termini)
8477.13 sequence-only estimate (linear, free termini)
3.60 sequence-only estimate (linear, free termini)
-8 sequence-only estimate (linear, free termini)
1.06 sequence-only estimate (linear, free termini)
-0.049 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP