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Peptide record

TPDB13873

Antibacterial Antifungal standard
46 amino acids
Basic Information
3D PDB MODEL
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TPDB13873
Antibacterial Antifungal
Anti-infective peptides
AntiBP3 dbAMP DRAMP Peptipedia AFP-GFuse Antifungipept CAFPdb
standard
No
A 46-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from AntiBP3, dbAMP, DRAMP, and other sources, with an available 3D structural model.
Sequence
MTPQGNKPSSHDVITGRWTPSDADRAAGRVSGFGVITNIINGGLDC
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C202H323N63O67S2
EY
G
4770.29
7.16
5
4
14
+0
1.77
-0.350
67.83
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
5500
1.15
13
Residue Composition
number
3
A
3
R
3
N
4
D
1
C
0
E
1
Q
7
G
1
H
4
I
1
L
1
K
1
M
1
F
3
P
4
S
4
T
1
W
0
Y
3
V
Amino Acid Distribution
A: 3 R: 3 N: 3 D: 4 C: 1 E: 0 Q: 1 G: 7 H: 1 I: 4 L: 1 K: 1 M: 1 F: 1 P: 3 S: 4 T: 4 W: 1 Y: 0 V: 3
Chemical Descriptors
46 reviewed residue count
C202H323N63O67S2 sequence-only estimate (linear, free termini)
4770.29 sequence-only estimate (linear, free termini)
7.16 sequence-only estimate (linear, free termini)
+0 sequence-only estimate (linear, free termini)
1.77 sequence-only estimate (linear, free termini)
-0.350 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP DRAMP CAFPdb Antifungipept