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Peptide record

TPDB13803

Antibacterial Antifungal standard
40 amino acids
Basic Information
3D PDB MODEL
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TPDB13803
Antibacterial Antifungal
Anti-infective peptides
AntiBP3 Peptipedia Antifungipept CAFPdb dbAMP
standard
No
A 40-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from AntiBP3, Peptipedia, Antifungipept, and other sources, with an available 3D structural model.
Sequence
GWVKKIGKKIERVGQNTRDATIQVIGVAQQAANVAATLKG
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C185H318N58O54
CHMFPSY
A
4218.92
11.08
7
2
17
+5
1.34
-0.197
100.00
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
5500
1.30
9
Residue Composition
number
6
A
2
R
2
N
1
D
0
C
1
E
4
Q
5
G
0
H
4
I
1
L
5
K
0
M
0
F
0
P
0
S
3
T
1
W
0
Y
5
V
Amino Acid Distribution
A: 6 R: 2 N: 2 D: 1 C: 0 E: 1 Q: 4 G: 5 H: 0 I: 4 L: 1 K: 5 M: 0 F: 0 P: 0 S: 0 T: 3 W: 1 Y: 0 V: 5
Chemical Descriptors
40 reviewed residue count
C185H318N58O54 sequence-only estimate (linear, free termini)
4218.92 sequence-only estimate (linear, free termini)
11.08 sequence-only estimate (linear, free termini)
+5 sequence-only estimate (linear, free termini)
1.34 sequence-only estimate (linear, free termini)
-0.197 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb Antifungipept