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Peptide record

TPDB13792

Antibacterial Antifungal standard
40 amino acids
Basic Information
3D PDB MODEL
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TPDB13792
Antibacterial Antifungal
Anti-infective peptides
AntiBP3 Peptipedia CAFPdb dbAMP
standard
No
A 40-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from AntiBP3, Peptipedia, CAFPdb, and other sources, with an available 3D structural model.
Sequence
QSVACTSYYCSKFCGSAGCSLYGCYLLHPGKICYCLHCSR
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C189H284N50O54S8
NDEMW
C
4377.12
8.09
5
0
14
+3
0.38
0.322
61.00
Mammalian: 0.8 hour Yeast: 10 min E.coli: >10 hour
7950
1.82
21
Residue Composition
number
2
A
1
R
0
N
0
D
8
C
0
E
1
Q
4
G
2
H
1
I
4
L
2
K
0
M
1
F
1
P
6
S
1
T
0
W
5
Y
1
V
Amino Acid Distribution
A: 2 R: 1 N: 0 D: 0 C: 8 E: 0 Q: 1 G: 4 H: 2 I: 1 L: 4 K: 2 M: 0 F: 1 P: 1 S: 6 T: 1 W: 0 Y: 5 V: 1
Chemical Descriptors
40 reviewed residue count
C189H284N50O54S8 sequence-only estimate (linear, free termini)
4377.12 sequence-only estimate (linear, free termini)
8.09 sequence-only estimate (linear, free termini)
+3 sequence-only estimate (linear, free termini)
0.38 sequence-only estimate (linear, free termini)
0.322 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb