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Peptide record

TPDB13626

Antibacterial Antifungal standard
32 amino acids
Basic Information
3D PDB MODEL
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TPDB13626
Antibacterial Antifungal
Anti-infective peptides
AntiBP3 Peptipedia Antifungipept CAFPdb dbAMP
standard
No
A 32-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from AntiBP3, Peptipedia, Antifungipept, and other sources, with an available 3D structural model.
Sequence
CGGRLFDKIRQVIRKGAGGRLFDKIRQVIRKG
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C160H278N56O39S1
NEHMPSTWY
RG
3642.38
12.13
10
2
11
+8
2.75
-0.472
94.38
Mammalian: 1.2 hour Yeast: >20 hour E.coli: >10 hour
0
0.00
3
Residue Composition
number
1
A
6
R
0
N
2
D
1
C
0
E
2
Q
6
G
0
H
4
I
2
L
4
K
0
M
2
F
0
P
0
S
0
T
0
W
0
Y
2
V
Amino Acid Distribution
A: 1 R: 6 N: 0 D: 2 C: 1 E: 0 Q: 2 G: 6 H: 0 I: 4 L: 2 K: 4 M: 0 F: 2 P: 0 S: 0 T: 0 W: 0 Y: 0 V: 2
Chemical Descriptors
32 reviewed residue count
C160H278N56O39S1 sequence-only estimate (linear, free termini)
3642.38 sequence-only estimate (linear, free termini)
12.13 sequence-only estimate (linear, free termini)
+8 sequence-only estimate (linear, free termini)
2.75 sequence-only estimate (linear, free termini)
-0.472 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb Antifungipept