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Peptide record

TPDB13584

Antibacterial Antifungal standard
29 amino acids
Basic Information
3D PDB MODEL
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TPDB13584
Antibacterial Antifungal
Anti-infective peptides
AntiBP3 dbAMP DRAMP Peptipedia AFP-GFuse CAFPdb
standard
No
A 29-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from AntiBP3, dbAMP, DRAMP, and other sources, with an available 3D structural model.
Sequence
GVKELFGKAWGLVKKHLPKACGLLGYVKQ
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C150H243N39O34S1
RNDIMST
K
3168.88
10.36
7
1
13
+5
-0.04
0.038
104.14
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
6990
2.21
3
Residue Composition
number
2
A
0
R
0
N
0
D
1
C
1
E
1
Q
5
G
1
H
0
I
5
L
6
K
0
M
1
F
1
P
0
S
0
T
1
W
1
Y
3
V
Amino Acid Distribution
A: 2 R: 0 N: 0 D: 0 C: 1 E: 1 Q: 1 G: 5 H: 1 I: 0 L: 5 K: 6 M: 0 F: 1 P: 1 S: 0 T: 0 W: 1 Y: 1 V: 3
Chemical Descriptors
29 reviewed residue count
C150H243N39O34S1 sequence-only estimate (linear, free termini)
3168.88 sequence-only estimate (linear, free termini)
10.36 sequence-only estimate (linear, free termini)
+5 sequence-only estimate (linear, free termini)
-0.04 sequence-only estimate (linear, free termini)
0.038 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP DRAMP CAFPdb