Back to search

Peptide record

TPDB13411

Antibacterial Antifungal standard
24 amino acids
Basic Information
3D PDB MODEL
Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.
TPDB13411
Antibacterial Antifungal
Anti-infective peptides
AntiBP3 dbAMP Peptipedia Antifungipept CAFPdb
standard
No
A 24-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from AntiBP3, dbAMP, Peptipedia, and other sources, with an available 3D structural model.
Sequence
FGSLFSLGSKLLPTVFKLFSRKKQ
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C131H210N32O31
ANDCEHIMWY
L
2729.30
11.80
5
0
10
+5
0.68
0.188
93.33
Mammalian: 1.1 hour Yeast: 3 min E.coli: 2 min
0
0.00
6
Residue Composition
number
0
A
1
R
0
N
0
D
0
C
0
E
1
Q
2
G
0
H
0
I
5
L
4
K
0
M
4
F
1
P
4
S
1
T
0
W
0
Y
1
V
Amino Acid Distribution
A: 0 R: 1 N: 0 D: 0 C: 0 E: 0 Q: 1 G: 2 H: 0 I: 0 L: 5 K: 4 M: 0 F: 4 P: 1 S: 4 T: 1 W: 0 Y: 0 V: 1
Chemical Descriptors
24 reviewed residue count
C131H210N32O31 sequence-only estimate (linear, free termini)
2729.30 sequence-only estimate (linear, free termini)
11.80 sequence-only estimate (linear, free termini)
+5 sequence-only estimate (linear, free termini)
0.68 sequence-only estimate (linear, free termini)
0.188 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb Antifungipept