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Peptide record

TPDB13374

Antibacterial Antifungal standard
23 amino acids
Basic Information
3D PDB MODEL
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TPDB13374
Antibacterial Antifungal
Anti-infective peptides
AntiBP3 Peptipedia CAFPdb dbAMP
standard
No
A 23-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from AntiBP3, Peptipedia, CAFPdb, and other sources, with an available 3D structural model.
Sequence
RKRCRFCCNCCPGKQGCVFCCGF
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C106H168N36O26S8
ADEHILMSTWY
C
2619.21
8.53
5
0
4
+5
1.83
0.065
12.61
Mammalian: 1 hour Yeast: 2 min E.coli: 2 min
500
0.19
10
Residue Composition
number
0
A
3
R
1
N
0
D
8
C
0
E
1
Q
3
G
0
H
0
I
0
L
2
K
0
M
3
F
1
P
0
S
0
T
0
W
0
Y
1
V
Amino Acid Distribution
A: 0 R: 3 N: 1 D: 0 C: 8 E: 0 Q: 1 G: 3 H: 0 I: 0 L: 0 K: 2 M: 0 F: 3 P: 1 S: 0 T: 0 W: 0 Y: 0 V: 1
Chemical Descriptors
23 reviewed residue count
C106H168N36O26S8 sequence-only estimate (linear, free termini)
2619.21 sequence-only estimate (linear, free termini)
8.53 sequence-only estimate (linear, free termini)
+5 sequence-only estimate (linear, free termini)
1.83 sequence-only estimate (linear, free termini)
0.065 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb