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Peptide record

TPDB13222

Antibacterial standard
20 amino acids
Basic Information
3D PDB MODEL
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TPDB13222
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 20-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
GQLNKFIKKAQRKFHEKFAK
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C114H184N34O26
DCMPSTWYV
K
2446.93
11.19
8
1
7
+6
2.70
-1.260
49.00
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
0
0.00
3
Residue Composition
number
2
A
1
R
1
N
0
D
0
C
1
E
2
Q
1
G
1
H
1
I
1
L
6
K
0
M
3
F
0
P
0
S
0
T
0
W
0
Y
0
V
Amino Acid Distribution
A: 2 R: 1 N: 1 D: 0 C: 0 E: 1 Q: 2 G: 1 H: 1 I: 1 L: 1 K: 6 M: 0 F: 3 P: 0 S: 0 T: 0 W: 0 Y: 0 V: 0
Chemical Descriptors
20 reviewed residue count
C114H184N34O26 sequence-only estimate (linear, free termini)
2446.93 sequence-only estimate (linear, free termini)
11.19 sequence-only estimate (linear, free termini)
+6 sequence-only estimate (linear, free termini)
2.70 sequence-only estimate (linear, free termini)
-1.260 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA