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Peptide record

TPDB13221

Antibacterial Antifungal standard
20 amino acids
Basic Information
3D PDB MODEL
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TPDB13221
Antibacterial Antifungal
Anti-infective peptides
AntiBP3 Peptipedia Antifungipept CAFPdb dbAMP
standard
No
A 20-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from AntiBP3, Peptipedia, Antifungipept, and other sources, with an available 3D structural model.
Sequence
YCSKFCGSAGCSLYGCYLLH
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C96H139N23O27S4
RNDEQIMPTWV
C
2175.54
7.84
2
0
8
+1
-0.33
0.570
63.50
Mammalian: 2.8 hour Yeast: 10 min E.coli: 2 min
4720
2.17
10
Residue Composition
number
1
A
0
R
0
N
0
D
4
C
0
E
0
Q
3
G
1
H
0
I
3
L
1
K
0
M
1
F
0
P
3
S
0
T
0
W
3
Y
0
V
Amino Acid Distribution
A: 1 R: 0 N: 0 D: 0 C: 4 E: 0 Q: 0 G: 3 H: 1 I: 0 L: 3 K: 1 M: 0 F: 1 P: 0 S: 3 T: 0 W: 0 Y: 3 V: 0
Chemical Descriptors
20 reviewed residue count
C96H139N23O27S4 sequence-only estimate (linear, free termini)
2175.54 sequence-only estimate (linear, free termini)
7.84 sequence-only estimate (linear, free termini)
+1 sequence-only estimate (linear, free termini)
-0.33 sequence-only estimate (linear, free termini)
0.570 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb Antifungipept