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Peptide record

TPDB13143

Antibacterial standard
19 amino acids
Basic Information
3D PDB MODEL
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TPDB13143
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 19-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
PKLAIRITCKIHKKVAISV
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C97H176N28O22S1
NDEQGMFWY
IK
2118.70
10.98
6
0
9
+5
0.54
0.521
143.68
Mammalian: >20 hour Yeast: >20 hour E.coli: ?
0
0.00
3
Residue Composition
number
2
A
1
R
0
N
0
D
1
C
0
E
0
Q
0
G
1
H
4
I
1
L
4
K
0
M
0
F
1
P
1
S
1
T
0
W
0
Y
2
V
Amino Acid Distribution
A: 2 R: 1 N: 0 D: 0 C: 1 E: 0 Q: 0 G: 0 H: 1 I: 4 L: 1 K: 4 M: 0 F: 0 P: 1 S: 1 T: 1 W: 0 Y: 0 V: 2
Chemical Descriptors
19 reviewed residue count
C97H176N28O22S1 sequence-only estimate (linear, free termini)
2118.70 sequence-only estimate (linear, free termini)
10.98 sequence-only estimate (linear, free termini)
+5 sequence-only estimate (linear, free termini)
0.54 sequence-only estimate (linear, free termini)
0.521 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA