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Peptide record

TPDB13135

Antibacterial standard
19 amino acids
Basic Information
3D PDB MODEL
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TPDB13135
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 19-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
MMQSGGTFGTFMAIGMGIR
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C85H137N23O24S4
NDCEHLKPWYV
G
1993.40
11.05
1
0
9
+1
-0.14
0.621
46.32
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
0
0.00
4
Residue Composition
number
1
A
1
R
0
N
0
D
0
C
0
E
1
Q
5
G
0
H
2
I
0
L
0
K
4
M
2
F
0
P
1
S
2
T
0
W
0
Y
0
V
Amino Acid Distribution
A: 1 R: 1 N: 0 D: 0 C: 0 E: 0 Q: 1 G: 5 H: 0 I: 2 L: 0 K: 0 M: 4 F: 2 P: 0 S: 1 T: 2 W: 0 Y: 0 V: 0
Chemical Descriptors
19 reviewed residue count
C85H137N23O24S4 sequence-only estimate (linear, free termini)
1993.40 sequence-only estimate (linear, free termini)
11.05 sequence-only estimate (linear, free termini)
+1 sequence-only estimate (linear, free termini)
-0.14 sequence-only estimate (linear, free termini)
0.621 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA