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Peptide record

TPDB13106

Antibacterial Antifungal standard
18 amino acids
Basic Information
3D PDB MODEL
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TPDB13106
Antibacterial Antifungal
Anti-infective peptides
AntiBP3 dbAMP DRAMP Peptipedia AFP-GFuse CAFPdb
standard
No
A 18-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from AntiBP3, dbAMP, DRAMP, and other sources, with an available 3D structural model.
Sequence
IWGALLGTLIPAITSAIQ
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C87H144N20O23
RNDCEHKMFYV
I
1838.22
6.02
0
0
11
-0
-1.67
1.433
168.33
Mammalian: 20 hour Yeast: 30 min E.coli: >10 hour
5500
2.99
4
Residue Composition
number
3
A
0
R
0
N
0
D
0
C
0
E
1
Q
2
G
0
H
4
I
3
L
0
K
0
M
0
F
1
P
1
S
2
T
1
W
0
Y
0
V
Amino Acid Distribution
A: 3 R: 0 N: 0 D: 0 C: 0 E: 0 Q: 1 G: 2 H: 0 I: 4 L: 3 K: 0 M: 0 F: 0 P: 1 S: 1 T: 2 W: 1 Y: 0 V: 0
Chemical Descriptors
18 reviewed residue count
C87H144N20O23 sequence-only estimate (linear, free termini)
1838.22 sequence-only estimate (linear, free termini)
6.02 sequence-only estimate (linear, free termini)
-0 sequence-only estimate (linear, free termini)
-1.67 sequence-only estimate (linear, free termini)
1.433 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP DRAMP CAFPdb