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Peptide record

TPDB13079

Antibacterial standard
18 amino acids
Basic Information
3D PDB MODEL
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TPDB13079
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 18-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
CATRESLSGVCEISGRLY
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C80H134N24O28S2
NDQHKMFPW
S
1944.21
6.28
2
2
6
-0
1.74
0.106
86.67
Mammalian: 1.2 hour Yeast: >20 hour E.coli: >10 hour
1615
0.83
7
Residue Composition
number
1
A
2
R
0
N
0
D
2
C
2
E
0
Q
2
G
0
H
1
I
2
L
0
K
0
M
0
F
0
P
3
S
1
T
0
W
1
Y
1
V
Amino Acid Distribution
A: 1 R: 2 N: 0 D: 0 C: 2 E: 2 Q: 0 G: 2 H: 0 I: 1 L: 2 K: 0 M: 0 F: 0 P: 0 S: 3 T: 1 W: 0 Y: 1 V: 1
Chemical Descriptors
18 reviewed residue count
C80H134N24O28S2 sequence-only estimate (linear, free termini)
1944.21 sequence-only estimate (linear, free termini)
6.28 sequence-only estimate (linear, free termini)
-0 sequence-only estimate (linear, free termini)
1.74 sequence-only estimate (linear, free termini)
0.106 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA