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Peptide record

TPDB13073

Antibacterial Antifungal standard
18 amino acids
Basic Information
3D PDB MODEL
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TPDB13073
Antibacterial Antifungal
Anti-infective peptides
AntiBP3 Peptipedia Antifungipept CAFPdb dbAMP
standard
No
A 18-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from AntiBP3, Peptipedia, Antifungipept, and other sources, with an available 3D structural model.
Sequence
GACHRQGFGFACFCYKKC
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C89H128N26O21S4
NDEILMPSTWV
C
2026.40
8.71
4
0
6
+3
0.88
0.028
11.11
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
1740
0.86
6
Residue Composition
number
2
A
1
R
0
N
0
D
4
C
0
E
1
Q
3
G
1
H
0
I
0
L
2
K
0
M
3
F
0
P
0
S
0
T
0
W
1
Y
0
V
Amino Acid Distribution
A: 2 R: 1 N: 0 D: 0 C: 4 E: 0 Q: 1 G: 3 H: 1 I: 0 L: 0 K: 2 M: 0 F: 3 P: 0 S: 0 T: 0 W: 0 Y: 1 V: 0
Chemical Descriptors
18 reviewed residue count
C89H128N26O21S4 sequence-only estimate (linear, free termini)
2026.40 sequence-only estimate (linear, free termini)
8.71 sequence-only estimate (linear, free termini)
+3 sequence-only estimate (linear, free termini)
0.88 sequence-only estimate (linear, free termini)
0.028 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb Antifungipept