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Peptide record

TPDB13061

Antibacterial standard
18 amino acids
Basic Information
3D PDB MODEL
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TPDB13061
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 18-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
FFGHLFKLATKIIPSLFR
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C107H163N25O21
NDCEQMWYV
F
2135.63
11.64
4
0
10
+3
-0.15
0.800
113.89
Mammalian: 1.1 hour Yeast: 3 min E.coli: 2 min
0
0.00
2
Residue Composition
number
1
A
1
R
0
N
0
D
0
C
0
E
0
Q
1
G
1
H
2
I
3
L
2
K
0
M
4
F
1
P
1
S
1
T
0
W
0
Y
0
V
Amino Acid Distribution
A: 1 R: 1 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 1 H: 1 I: 2 L: 3 K: 2 M: 0 F: 4 P: 1 S: 1 T: 1 W: 0 Y: 0 V: 0
Chemical Descriptors
18 reviewed residue count
C107H163N25O21 sequence-only estimate (linear, free termini)
2135.63 sequence-only estimate (linear, free termini)
11.64 sequence-only estimate (linear, free termini)
+3 sequence-only estimate (linear, free termini)
-0.15 sequence-only estimate (linear, free termini)
0.800 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA