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Peptide record

TPDB13030

Antibacterial Antifungal standard
17 amino acids
Basic Information
3D PDB MODEL
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TPDB13030
Antibacterial Antifungal
Anti-infective peptides
AntiBP3 Peptipedia Antifungipept CAFPdb dbAMP
standard
No
A 17-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from AntiBP3, Peptipedia, Antifungipept, and other sources, with an available 3D structural model.
Sequence
GWKAIHKAAKGIHTYVN
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C88H136N26O21
RDCEQLMFPS
AK
1894.21
10.46
5
0
8
+3
0.69
-0.394
80.59
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
6990
3.69
3
Residue Composition
number
3
A
0
R
1
N
0
D
0
C
0
E
0
Q
2
G
2
H
2
I
0
L
3
K
0
M
0
F
0
P
0
S
1
T
1
W
1
Y
1
V
Amino Acid Distribution
A: 3 R: 0 N: 1 D: 0 C: 0 E: 0 Q: 0 G: 2 H: 2 I: 2 L: 0 K: 3 M: 0 F: 0 P: 0 S: 0 T: 1 W: 1 Y: 1 V: 1
Chemical Descriptors
17 reviewed residue count
C88H136N26O21 sequence-only estimate (linear, free termini)
1894.21 sequence-only estimate (linear, free termini)
10.46 sequence-only estimate (linear, free termini)
+3 sequence-only estimate (linear, free termini)
0.69 sequence-only estimate (linear, free termini)
-0.394 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb Antifungipept