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Peptide record

TPDB12904

Antibacterial standard
15 amino acids
Basic Information
3D PDB MODEL
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TPDB12904
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 15-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
LRKATRRLVQLIVSG
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C75H140N26O19
NDCEHMFPWY
RL
1710.10
12.71
4
0
7
+4
2.09
0.220
149.33
Mammalian: 5.5 hour Yeast: 3 min E.coli: 2 min
0
0.00
3
Residue Composition
number
1
A
3
R
0
N
0
D
0
C
0
E
1
Q
1
G
0
H
1
I
3
L
1
K
0
M
0
F
0
P
1
S
1
T
0
W
0
Y
2
V
Amino Acid Distribution
A: 1 R: 3 N: 0 D: 0 C: 0 E: 0 Q: 1 G: 1 H: 0 I: 1 L: 3 K: 1 M: 0 F: 0 P: 0 S: 1 T: 1 W: 0 Y: 0 V: 2
Chemical Descriptors
15 reviewed residue count
C75H140N26O19 sequence-only estimate (linear, free termini)
1710.10 sequence-only estimate (linear, free termini)
12.71 sequence-only estimate (linear, free termini)
+4 sequence-only estimate (linear, free termini)
2.09 sequence-only estimate (linear, free termini)
0.220 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA