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Peptide record

TPDB12736

Antibacterial standard
13 amino acids
Basic Information
3D PDB MODEL
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TPDB12736
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 13-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
DLASLARLYALAR
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C64H109N19O18
NCEQGHIKMFPTWV
AL
1432.69
9.87
2
1
9
+1
1.17
0.600
150.77
Mammalian: 1.1 hour Yeast: 3 min E.coli: >10 hour
1490
1.04
2
Residue Composition
number
4
A
2
R
0
N
1
D
0
C
0
E
0
Q
0
G
0
H
0
I
4
L
0
K
0
M
0
F
0
P
1
S
0
T
0
W
1
Y
0
V
Amino Acid Distribution
A: 4 R: 2 N: 0 D: 1 C: 0 E: 0 Q: 0 G: 0 H: 0 I: 0 L: 4 K: 0 M: 0 F: 0 P: 0 S: 1 T: 0 W: 0 Y: 1 V: 0
Chemical Descriptors
13 reviewed residue count
C64H109N19O18 sequence-only estimate (linear, free termini)
1432.69 sequence-only estimate (linear, free termini)
9.87 sequence-only estimate (linear, free termini)
+1 sequence-only estimate (linear, free termini)
1.17 sequence-only estimate (linear, free termini)
0.600 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA