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Peptide record

TPDB12602

Antibacterial standard
13 amino acids
Basic Information
3D PDB MODEL
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TPDB12602
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 13-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
WKKLVPYKIHAGI
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C77H121N19O15
RNDCEQMFST
K
1552.93
10.46
4
0
7
+3
-0.19
-0.023
120.00
Mammalian: 2.8 hour Yeast: 3 min E.coli: 2 min
6990
4.50
1
Residue Composition
number
1
A
0
R
0
N
0
D
0
C
0
E
0
Q
1
G
1
H
2
I
1
L
3
K
0
M
0
F
1
P
0
S
0
T
1
W
1
Y
1
V
Amino Acid Distribution
A: 1 R: 0 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 1 H: 1 I: 2 L: 1 K: 3 M: 0 F: 0 P: 1 S: 0 T: 0 W: 1 Y: 1 V: 1
Chemical Descriptors
13 reviewed residue count
C77H121N19O15 sequence-only estimate (linear, free termini)
1552.93 sequence-only estimate (linear, free termini)
10.46 sequence-only estimate (linear, free termini)
+3 sequence-only estimate (linear, free termini)
-0.19 sequence-only estimate (linear, free termini)
-0.023 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA