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Peptide record

TPDB12424

Antibacterial Antifungal standard
12 amino acids
Basic Information
3D PDB MODEL
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TPDB12424
Antibacterial Antifungal
Anti-infective peptides
AntiBP3 Peptipedia CAFPdb dbAMP
standard
No
A 12-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from AntiBP3, Peptipedia, CAFPdb, and other sources, with an available 3D structural model.
Sequence
RKIKRYLRRMIW
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C79H135N27O14S1
ANDCEQGHFPSTV
R
1719.17
12.41
6
0
6
+6
4.29
-1.108
97.50
Mammalian: 1 hour Yeast: 2 min E.coli: 2 min
6990
4.07
1
Residue Composition
number
0
A
4
R
0
N
0
D
0
C
0
E
0
Q
0
G
0
H
2
I
1
L
2
K
1
M
0
F
0
P
0
S
0
T
1
W
1
Y
0
V
Amino Acid Distribution
A: 0 R: 4 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 0 H: 0 I: 2 L: 1 K: 2 M: 1 F: 0 P: 0 S: 0 T: 0 W: 1 Y: 1 V: 0
Chemical Descriptors
12 reviewed residue count
C79H135N27O14S1 sequence-only estimate (linear, free termini)
1719.17 sequence-only estimate (linear, free termini)
12.41 sequence-only estimate (linear, free termini)
+6 sequence-only estimate (linear, free termini)
4.29 sequence-only estimate (linear, free termini)
-1.108 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb