Back to search

Peptide record

TPDB12395

Antibacterial Antifungal standard
11 amino acids
Basic Information
3D PDB MODEL
Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.
TPDB12395
Antibacterial Antifungal
Anti-infective peptides
AntiBP3 Peptipedia CAFPdb dbAMP
standard
No
A 11-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from AntiBP3, Peptipedia, CAFPdb, and other sources, with an available 3D structural model.
Sequence
RKIKVYLRRMK
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C67H123N23O13S1
ANDCEQGHFPSTW
RK
1490.92
12.15
6
0
5
+6
4.12
-1.100
97.27
Mammalian: 1 hour Yeast: 2 min E.coli: 2 min
1490
1.00
1
Residue Composition
number
0
A
3
R
0
N
0
D
0
C
0
E
0
Q
0
G
0
H
1
I
1
L
3
K
1
M
0
F
0
P
0
S
0
T
0
W
1
Y
1
V
Amino Acid Distribution
A: 0 R: 3 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 0 H: 0 I: 1 L: 1 K: 3 M: 1 F: 0 P: 0 S: 0 T: 0 W: 0 Y: 1 V: 1
Chemical Descriptors
11 reviewed residue count
C67H123N23O13S1 sequence-only estimate (linear, free termini)
1490.92 sequence-only estimate (linear, free termini)
12.15 sequence-only estimate (linear, free termini)
+6 sequence-only estimate (linear, free termini)
4.12 sequence-only estimate (linear, free termini)
-1.100 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb