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Peptide record

TPDB12300

Antibacterial Antifungal standard
10 amino acids
Basic Information
3D PDB MODEL
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TPDB12300
Antibacterial Antifungal
Anti-infective peptides
AntiBP3 Peptipedia CAFPdb dbAMP
standard
No
A 10-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from AntiBP3, Peptipedia, CAFPdb, and other sources, with an available 3D structural model.
Sequence
RWKYPKPLKR
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C66H106N20O12
ANDCEQGHIMFSTV
K
1371.69
11.59
5
0
3
+5
3.94
-2.230
39.00
Mammalian: 1 hour Yeast: 2 min E.coli: 2 min
6990
5.10
1
Residue Composition
number
0
A
2
R
0
N
0
D
0
C
0
E
0
Q
0
G
0
H
0
I
1
L
3
K
0
M
0
F
2
P
0
S
0
T
1
W
1
Y
0
V
Amino Acid Distribution
A: 0 R: 2 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 0 H: 0 I: 0 L: 1 K: 3 M: 0 F: 0 P: 2 S: 0 T: 0 W: 1 Y: 1 V: 0
Chemical Descriptors
10 reviewed residue count
C66H106N20O12 sequence-only estimate (linear, free termini)
1371.69 sequence-only estimate (linear, free termini)
11.59 sequence-only estimate (linear, free termini)
+5 sequence-only estimate (linear, free termini)
3.94 sequence-only estimate (linear, free termini)
-2.230 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb