Back to search

Peptide record

TPDB12289

Antibacterial standard
10 amino acids
Basic Information
3D PDB MODEL
Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.
TPDB12289
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 10-aa standard natural antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
CLIMKVRRKK
Physicochemical Analysis
C55H107N19O11S2
ANDEQGHFPSTWY
K
1274.70
11.56
5
0
4
+5
3.32
-0.380
107.00
Mammalian: 1.2 hour Yeast: >20 hour E.coli: >10 hour
0
0.00
1
Residue Composition
number
0
A
2
R
0
N
0
D
1
C
0
E
0
Q
0
G
0
H
1
I
1
L
3
K
1
M
0
F
0
P
0
S
0
T
0
W
0
Y
1
V
Amino Acid Distribution
A: 0 R: 2 N: 0 D: 0 C: 1 E: 0 Q: 0 G: 0 H: 0 I: 1 L: 1 K: 3 M: 1 F: 0 P: 0 S: 0 T: 0 W: 0 Y: 0 V: 1
Chemical Descriptors
10
C55H107N19O11S2
1274.70
11.56
+5
3.32
-0.380
Evidence Records 2 records
Evidence 1 Activity

Activity

MIC
Antibacterial
12.6 µM

Target

B. subtilis 168 HT

Source & Reference

NA

Other

Active against B. subtilis 168 HT (MIC 12.6 uM), E.coli MG1655 (MIC 100.3 uM), and C. trachomatis D/UW-3/Cx (MIC90 12.5 uM). Note that wh
Evidence 2 Activity

Activity

MIC
Antibacterial
100.3 µM

Target

E.coli MG1655

Source & Reference

NA

Other

Active against B. subtilis 168 HT (MIC 12.6 uM), E.coli MG1655 (MIC 100.3 uM), and C. trachomatis D/UW-3/Cx (MIC90 12.5 uM). Note that whether this is a or part of the