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Peptide record

TPDB12246

Antibacterial standard
8 amino acids
Basic Information
3D PDB MODEL
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TPDB12246
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 8-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
FFFCSRCF
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C51H65N11O10S2
ANDEQGHILKMPTWYV
F
1056.27
8.30
1
0
4
+1
0.48
1.362
0.00
Mammalian: 1.1 hour Yeast: 3 min E.coli: 2 min
125
0.12
3
Residue Composition
number
0
A
1
R
0
N
0
D
2
C
0
E
0
Q
0
G
0
H
0
I
0
L
0
K
0
M
4
F
0
P
1
S
0
T
0
W
0
Y
0
V
Amino Acid Distribution
A: 0 R: 1 N: 0 D: 0 C: 2 E: 0 Q: 0 G: 0 H: 0 I: 0 L: 0 K: 0 M: 0 F: 4 P: 0 S: 1 T: 0 W: 0 Y: 0 V: 0
Chemical Descriptors
8 reviewed residue count
C51H65N11O10S2 sequence-only estimate (linear, free termini)
1056.27 sequence-only estimate (linear, free termini)
8.30 sequence-only estimate (linear, free termini)
+1 sequence-only estimate (linear, free termini)
0.48 sequence-only estimate (linear, free termini)
1.362 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA