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Peptide record

TPDB12231

Antibacterial Antifungal standard
8 amino acids
Basic Information
3D PDB MODEL
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TPDB12231
Antibacterial Antifungal
Anti-infective peptides
AntiBP3 Peptipedia CAFPdb dbAMP
standard
No
A 8-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from AntiBP3, Peptipedia, CAFPdb, and other sources, with an available 3D structural model.
Sequence
VKVKVKVK
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C44H86N12O9
ARNDCEQGHILMFPSTWY
KV
927.24
11.00
4
0
4
+4
0.75
0.150
145.00
Mammalian: 100 hour Yeast: >20 hour E.coli: >10 hour
0
0.00
0
Residue Composition
number
0
A
0
R
0
N
0
D
0
C
0
E
0
Q
0
G
0
H
0
I
0
L
4
K
0
M
0
F
0
P
0
S
0
T
0
W
0
Y
4
V
Amino Acid Distribution
A: 0 R: 0 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 0 H: 0 I: 0 L: 0 K: 4 M: 0 F: 0 P: 0 S: 0 T: 0 W: 0 Y: 0 V: 4
Chemical Descriptors
8 reviewed residue count
C44H86N12O9 sequence-only estimate (linear, free termini)
927.24 sequence-only estimate (linear, free termini)
11.00 sequence-only estimate (linear, free termini)
+4 sequence-only estimate (linear, free termini)
0.75 sequence-only estimate (linear, free termini)
0.150 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb