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Peptide record

TPDB12188

Antibacterial Antifungal standard
48 amino acids
Basic Information
3D PDB MODEL
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TPDB12188
Antibacterial Antifungal
Anti-infective peptides
AntiBP3 Peptipedia CAFPdb dbAMP
standard
No
A 48-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from AntiBP3, Peptipedia, CAFPdb, and other sources, with an available 3D structural model.
Sequence
DFGCARGMIFVCMRRCARMYPGSTGYCQGFRCMCDTHIPIRRPPFIMG
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C236H368N72O59S11
NELKW
R
5510.63
8.90
8
2
18
+5
1.60
0.056
42.71
Mammalian: 1.1 hour Yeast: 3 min E.coli: >10 hour
3355
0.61
12
Residue Composition
number
2
A
7
R
0
N
2
D
6
C
0
E
1
Q
6
G
1
H
4
I
0
L
0
K
5
M
4
F
4
P
1
S
2
T
0
W
2
Y
1
V
Amino Acid Distribution
A: 2 R: 7 N: 0 D: 2 C: 6 E: 0 Q: 1 G: 6 H: 1 I: 4 L: 0 K: 0 M: 5 F: 4 P: 4 S: 1 T: 2 W: 0 Y: 2 V: 1
Chemical Descriptors
48 reviewed residue count
C236H368N72O59S11 sequence-only estimate (linear, free termini)
5510.63 sequence-only estimate (linear, free termini)
8.90 sequence-only estimate (linear, free termini)
+5 sequence-only estimate (linear, free termini)
1.60 sequence-only estimate (linear, free termini)
0.056 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb