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Peptide record

TPDB12083

Antibacterial Antifungal standard
45 amino acids
Basic Information
3D PDB MODEL
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TPDB12083
Antibacterial Antifungal
Anti-infective peptides
AntiBP3 Peptipedia Antifungipept CAFPdb dbAMP
standard
No
A 45-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from AntiBP3, Peptipedia, Antifungipept, and other sources, with an available 3D structural model.
Sequence
KKDQLGKNEEGAPQEGILEDMPVDPDNEAYEMPSEEGYQDYEPEA
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C216H323N53O85S2
RCHFTW
E
5086.36
3.51
3
15
12
-12
2.88
-1.567
39.11
Mammalian: 1.3 hour Yeast: 3 min E.coli: 2 min
4470
0.88
9
Residue Composition
number
3
A
0
R
2
N
5
D
0
C
10
E
3
Q
4
G
0
H
1
I
2
L
3
K
2
M
0
F
5
P
1
S
0
T
0
W
3
Y
1
V
Amino Acid Distribution
A: 3 R: 0 N: 2 D: 5 C: 0 E: 10 Q: 3 G: 4 H: 0 I: 1 L: 2 K: 3 M: 2 F: 0 P: 5 S: 1 T: 0 W: 0 Y: 3 V: 1
Chemical Descriptors
45 reviewed residue count
C216H323N53O85S2 sequence-only estimate (linear, free termini)
5086.36 sequence-only estimate (linear, free termini)
3.51 sequence-only estimate (linear, free termini)
-12 sequence-only estimate (linear, free termini)
2.88 sequence-only estimate (linear, free termini)
-1.567 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb Antifungipept