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Peptide record

TPDB12063

Antibacterial Antifungal standard
44 amino acids
Basic Information
3D PDB MODEL
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TPDB12063
Antibacterial Antifungal
Anti-infective peptides
AntiBP3 Peptipedia Antifungipept
standard
No
A 44-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from AntiBP3, Peptipedia, and Antifungipept, with an available 3D structural model.
Sequence
GFGCPNDYSCSNHCRDSIGCRGGYCKYQLICTCYGCKKRRSIQE
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C205H319N65O64S8
AMWV
C
4974.66
8.30
8
3
9
+4
2.45
-0.691
35.45
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
6460
1.30
21
Residue Composition
number
0
A
4
R
2
N
2
D
8
C
1
E
2
Q
6
G
1
H
3
I
1
L
3
K
0
M
1
F
1
P
4
S
1
T
0
W
4
Y
0
V
Amino Acid Distribution
A: 0 R: 4 N: 2 D: 2 C: 8 E: 1 Q: 2 G: 6 H: 1 I: 3 L: 1 K: 3 M: 0 F: 1 P: 1 S: 4 T: 1 W: 0 Y: 4 V: 0
Chemical Descriptors
44 reviewed residue count
C205H319N65O64S8 sequence-only estimate (linear, free termini)
4974.66 sequence-only estimate (linear, free termini)
8.30 sequence-only estimate (linear, free termini)
+4 sequence-only estimate (linear, free termini)
2.45 sequence-only estimate (linear, free termini)
-0.691 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

Antifungipept