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Peptide record

TPDB12059

Antibacterial Antifungal standard
44 amino acids
Basic Information
3D PDB MODEL
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TPDB12059
Antibacterial Antifungal
Anti-infective peptides
AntiBP3 Peptipedia Antifungipept CAFPdb dbAMP
standard
No
A 44-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from AntiBP3, Peptipedia, Antifungipept, and other sources, with an available 3D structural model.
Sequence
AAAAGSCVWGAVNYTSDCAAECLLRGYKGGHCGSFANVNCWCRT
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C192H288N58O59S6
QIMP
A
4545.11
7.63
4
2
18
+1
0.77
0.186
55.68
Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour
14355
3.16
16
Residue Composition
number
8
A
2
R
3
N
1
D
6
C
1
E
0
Q
6
G
1
H
0
I
2
L
1
K
0
M
1
F
0
P
3
S
2
T
2
W
2
Y
3
V
Amino Acid Distribution
A: 8 R: 2 N: 3 D: 1 C: 6 E: 1 Q: 0 G: 6 H: 1 I: 0 L: 2 K: 1 M: 0 F: 1 P: 0 S: 3 T: 2 W: 2 Y: 2 V: 3
Chemical Descriptors
44 reviewed residue count
C192H288N58O59S6 sequence-only estimate (linear, free termini)
4545.11 sequence-only estimate (linear, free termini)
7.63 sequence-only estimate (linear, free termini)
+1 sequence-only estimate (linear, free termini)
0.77 sequence-only estimate (linear, free termini)
0.186 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb Antifungipept