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Peptide record

TPDB12042

Antibacterial Antifungal standard
44 amino acids
Basic Information
3D PDB MODEL
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TPDB12042
Antibacterial Antifungal
Anti-infective peptides
AntiBP3 Peptipedia Antifungipept CAFPdb dbAMP
standard
No
A 44-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from AntiBP3, Peptipedia, Antifungipept, and other sources, with an available 3D structural model.
Sequence
DKLIGSCVWGAVNYTSDCAAECKRRGYKGGHCGSFANVNCWCET
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C201H304N60O63S6
QMP
CG
4761.35
7.63
6
4
14
+1
1.54
-0.298
46.59
Mammalian: 1.1 hour Yeast: 3 min E.coli: >10 hour
14355
3.01
16
Residue Composition
number
4
A
2
R
3
N
2
D
6
C
2
E
0
Q
6
G
1
H
1
I
1
L
3
K
0
M
1
F
0
P
3
S
2
T
2
W
2
Y
3
V
Amino Acid Distribution
A: 4 R: 2 N: 3 D: 2 C: 6 E: 2 Q: 0 G: 6 H: 1 I: 1 L: 1 K: 3 M: 0 F: 1 P: 0 S: 3 T: 2 W: 2 Y: 2 V: 3
Chemical Descriptors
44 reviewed residue count
C201H304N60O63S6 sequence-only estimate (linear, free termini)
4761.35 sequence-only estimate (linear, free termini)
7.63 sequence-only estimate (linear, free termini)
+1 sequence-only estimate (linear, free termini)
1.54 sequence-only estimate (linear, free termini)
-0.298 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb Antifungipept