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Peptide record

TPDB12019

Antibacterial Antifungal standard
43 amino acids
Basic Information
3D PDB MODEL
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TPDB12019
Antibacterial Antifungal
Anti-infective peptides
AntiBP3 dbAMP Peptipedia Antifungipept CAFPdb
standard
No
A 43-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from AntiBP3, dbAMP, Peptipedia, and other sources, with an available 3D structural model.
Sequence
CLSGRYKGPCAVWDNETCRRVCKEEGRSSGHCSPSLKCWCEGC
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C195H307N63O62S8
QIMF
C
4782.45
7.85
8
5
8
+2
2.42
-0.677
33.95
Mammalian: 1.2 hour Yeast: >20 hour E.coli: >10 hour
12990
2.72
16
Residue Composition
number
1
A
4
R
1
N
1
D
8
C
4
E
0
Q
5
G
1
H
0
I
2
L
3
K
0
M
0
F
2
P
5
S
1
T
2
W
1
Y
2
V
Amino Acid Distribution
A: 1 R: 4 N: 1 D: 1 C: 8 E: 4 Q: 0 G: 5 H: 1 I: 0 L: 2 K: 3 M: 0 F: 0 P: 2 S: 5 T: 1 W: 2 Y: 1 V: 2
Chemical Descriptors
43 reviewed residue count
C195H307N63O62S8 sequence-only estimate (linear, free termini)
4782.45 sequence-only estimate (linear, free termini)
7.85 sequence-only estimate (linear, free termini)
+2 sequence-only estimate (linear, free termini)
2.42 sequence-only estimate (linear, free termini)
-0.677 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb Antifungipept