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Peptide record

TPDB12018

Antibacterial Antifungal standard
43 amino acids
Basic Information
3D PDB MODEL
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TPDB12018
Antibacterial Antifungal
Anti-infective peptides
AntiBP3 Peptipedia Antifungipept
standard
No
A 43-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from AntiBP3, Peptipedia, and Antifungipept, with an available 3D structural model.
Sequence
ATCDLFSFQSKWVTPNHAACAAHCTARGNRGGRCKKAVCHCRK
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C196H313N69O54S6
EIMY
A
4692.43
9.78
11
1
13
+7
2.17
-0.447
38.84
Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour
5875
1.25
14
Residue Composition
number
7
A
4
R
2
N
1
D
6
C
0
E
1
Q
3
G
3
H
0
I
1
L
4
K
0
M
2
F
1
P
2
S
3
T
1
W
0
Y
2
V
Amino Acid Distribution
A: 7 R: 4 N: 2 D: 1 C: 6 E: 0 Q: 1 G: 3 H: 3 I: 0 L: 1 K: 4 M: 0 F: 2 P: 1 S: 2 T: 3 W: 1 Y: 0 V: 2
Chemical Descriptors
43 reviewed residue count
C196H313N69O54S6 sequence-only estimate (linear, free termini)
4692.43 sequence-only estimate (linear, free termini)
9.78 sequence-only estimate (linear, free termini)
+7 sequence-only estimate (linear, free termini)
2.17 sequence-only estimate (linear, free termini)
-0.447 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

Antifungipept