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Peptide record

TPDB12005

Antibacterial Antifungal standard
43 amino acids
Basic Information
3D PDB MODEL
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TPDB12005
Antibacterial Antifungal
Anti-infective peptides
AntiBP3 Peptipedia Antifungipept CAFPdb dbAMP
standard
No
A 43-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from AntiBP3, Peptipedia, Antifungipept, and other sources, with an available 3D structural model.
Sequence
LVVAVTDGEADAAVEGLHDNTDFIHYGSHGKYPDNRPHGYPLD
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C206H301N57O68
CQMW
D
4664.00
4.42
6
8
16
-6
1.78
-0.614
72.56
Mammalian: 5.5 hour Yeast: 3 min E.coli: 2 min
4470
0.96
8
Residue Composition
number
4
A
1
R
2
N
6
D
0
C
2
E
0
Q
5
G
4
H
1
I
3
L
1
K
0
M
1
F
3
P
1
S
2
T
0
W
3
Y
4
V
Amino Acid Distribution
A: 4 R: 1 N: 2 D: 6 C: 0 E: 2 Q: 0 G: 5 H: 4 I: 1 L: 3 K: 1 M: 0 F: 1 P: 3 S: 1 T: 2 W: 0 Y: 3 V: 4
Chemical Descriptors
43 reviewed residue count
C206H301N57O68 sequence-only estimate (linear, free termini)
4664.00 sequence-only estimate (linear, free termini)
4.42 sequence-only estimate (linear, free termini)
-6 sequence-only estimate (linear, free termini)
1.78 sequence-only estimate (linear, free termini)
-0.614 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb Antifungipept