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Peptide record

TPDB12003

Antibacterial Antifungal standard
43 amino acids
Basic Information
3D PDB MODEL
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TPDB12003
Antibacterial Antifungal
Anti-infective peptides
AntiBP3 Peptipedia Antifungipept CAFPdb dbAMP
standard
No
A 43-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from AntiBP3, Peptipedia, Antifungipept, and other sources, with an available 3D structural model.
Sequence
VTCDVLSFEAKGIAVNHSAAALHCIALRKKGGSCQNGVAVCRN
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C186H312N60O56S4
MPWY
A
4413.13
8.73
7
2
18
+3
0.94
0.326
95.35
Mammalian: 100 hour Yeast: >20 hour E.coli: >10 hour
250
0.06
12
Residue Composition
number
7
A
2
R
3
N
1
D
4
C
1
E
1
Q
4
G
2
H
2
I
3
L
3
K
0
M
1
F
0
P
3
S
1
T
0
W
0
Y
5
V
Amino Acid Distribution
A: 7 R: 2 N: 3 D: 1 C: 4 E: 1 Q: 1 G: 4 H: 2 I: 2 L: 3 K: 3 M: 0 F: 1 P: 0 S: 3 T: 1 W: 0 Y: 0 V: 5
Chemical Descriptors
43 reviewed residue count
C186H312N60O56S4 sequence-only estimate (linear, free termini)
4413.13 sequence-only estimate (linear, free termini)
8.73 sequence-only estimate (linear, free termini)
+3 sequence-only estimate (linear, free termini)
0.94 sequence-only estimate (linear, free termini)
0.326 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb Antifungipept