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Peptide record

TPDB11964

Antibacterial Antifungal standard
42 amino acids
Basic Information
3D PDB MODEL
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TPDB11964
Antibacterial Antifungal
Anti-infective peptides
AntiBP3 Peptipedia Antifungipept CAFPdb dbAMP
standard
No
A 42-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from AntiBP3, Peptipedia, Antifungipept, and other sources, with an available 3D structural model.
Sequence
GEKVPKGKKGKADAGKEGNNPAENGDAKTDQAQKAEGAGDAK
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C171H286N56O65
RCHILMFSWY
K
4166.49
9.40
9
8
9
+1
2.85
-1.645
25.95
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
0
0.00
6
Residue Composition
number
8
A
0
R
3
N
4
D
0
C
4
E
2
Q
8
G
0
H
0
I
0
L
9
K
0
M
0
F
2
P
0
S
1
T
0
W
0
Y
1
V
Amino Acid Distribution
A: 8 R: 0 N: 3 D: 4 C: 0 E: 4 Q: 2 G: 8 H: 0 I: 0 L: 0 K: 9 M: 0 F: 0 P: 2 S: 0 T: 1 W: 0 Y: 0 V: 1
Chemical Descriptors
42 reviewed residue count
C171H286N56O65 sequence-only estimate (linear, free termini)
4166.49 sequence-only estimate (linear, free termini)
9.40 sequence-only estimate (linear, free termini)
+1 sequence-only estimate (linear, free termini)
2.85 sequence-only estimate (linear, free termini)
-1.645 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb Antifungipept