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Peptide record

TPDB11954

Antibacterial Antifungal standard
42 amino acids
Basic Information
3D PDB MODEL
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TPDB11954
Antibacterial Antifungal
Anti-infective peptides
AntiBP3 Peptipedia Antifungipept CAFPdb dbAMP
standard
No
A 42-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from AntiBP3, Peptipedia, Antifungipept, and other sources, with an available 3D structural model.
Sequence
DAEFRHDSGYEVRHQKLVFFAEDVGSNKGAIIGLMVGGVVIA
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C203H316N56O60S1
CPTW
GV
4533.14
5.31
6
6
20
-2
1.02
0.174
97.38
Mammalian: 1.1 hour Yeast: 3 min E.coli: >10 hour
1490
0.33
5
Residue Composition
number
4
A
2
R
1
N
3
D
0
C
3
E
1
Q
6
G
2
H
3
I
2
L
2
K
1
M
3
F
0
P
2
S
0
T
0
W
1
Y
6
V
Amino Acid Distribution
A: 4 R: 2 N: 1 D: 3 C: 0 E: 3 Q: 1 G: 6 H: 2 I: 3 L: 2 K: 2 M: 1 F: 3 P: 0 S: 2 T: 0 W: 0 Y: 1 V: 6
Chemical Descriptors
42 reviewed residue count
C203H316N56O60S1 sequence-only estimate (linear, free termini)
4533.14 sequence-only estimate (linear, free termini)
5.31 sequence-only estimate (linear, free termini)
-2 sequence-only estimate (linear, free termini)
1.02 sequence-only estimate (linear, free termini)
0.174 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb Antifungipept