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Peptide record

TPDB11853

Antibacterial Antifungal standard
39 amino acids
Basic Information
3D PDB MODEL
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TPDB11853
Antibacterial Antifungal
Anti-infective peptides
AntiBP3 Peptipedia Antifungipept CAFPdb dbAMP
standard
No
A 39-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from AntiBP3, Peptipedia, Antifungipept, and other sources, with an available 3D structural model.
Sequence
NPFKKLERVGQHIRDGIIKAGPAVEVIGQANSIARPAGK
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C183H308N58O51
CMTWY
AGI
4136.82
10.95
8
3
15
+4
1.62
-0.351
95.13
Mammalian: 1.4 hour Yeast: 3 min E.coli: >10 hour
0
0.00
5
Residue Composition
number
5
A
3
R
2
N
1
D
0
C
2
E
2
Q
5
G
1
H
5
I
1
L
4
K
0
M
1
F
3
P
1
S
0
T
0
W
0
Y
3
V
Amino Acid Distribution
A: 5 R: 3 N: 2 D: 1 C: 0 E: 2 Q: 2 G: 5 H: 1 I: 5 L: 1 K: 4 M: 0 F: 1 P: 3 S: 1 T: 0 W: 0 Y: 0 V: 3
Chemical Descriptors
39 reviewed residue count
C183H308N58O51 sequence-only estimate (linear, free termini)
4136.82 sequence-only estimate (linear, free termini)
10.95 sequence-only estimate (linear, free termini)
+4 sequence-only estimate (linear, free termini)
1.62 sequence-only estimate (linear, free termini)
-0.351 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb Antifungipept