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Peptide record

TPDB11772

Antibacterial Antifungal standard
38 amino acids
Basic Information
3D PDB MODEL
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TPDB11772
Antibacterial Antifungal
Anti-infective peptides
AntiBP3 Peptipedia CAFPdb dbAMP
standard
No
A 38-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from AntiBP3, Peptipedia, CAFPdb, and other sources, with an available 3D structural model.
Sequence
EWRPHGSNGGSSLRPGRPQTLPPQRPIQPDFNGPRQRF
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C189H291N65O53
ACKMYV
P
4321.79
12.40
7
2
6
+4
3.43
-1.561
30.79
Mammalian: 1 hour Yeast: 30 min E.coli: >10 hour
5500
1.27
10
Residue Composition
number
0
A
6
R
2
N
1
D
0
C
1
E
4
Q
5
G
1
H
1
I
2
L
0
K
0
M
2
F
8
P
3
S
1
T
1
W
0
Y
0
V
Amino Acid Distribution
A: 0 R: 6 N: 2 D: 1 C: 0 E: 1 Q: 4 G: 5 H: 1 I: 1 L: 2 K: 0 M: 0 F: 2 P: 8 S: 3 T: 1 W: 1 Y: 0 V: 0
Chemical Descriptors
38 reviewed residue count
C189H291N65O53 sequence-only estimate (linear, free termini)
4321.79 sequence-only estimate (linear, free termini)
12.40 sequence-only estimate (linear, free termini)
+4 sequence-only estimate (linear, free termini)
3.43 sequence-only estimate (linear, free termini)
-1.561 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb