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Peptide record

TPDB11672

Antibacterial Antifungal standard
37 amino acids
Basic Information
3D PDB MODEL
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TPDB11672
Antibacterial Antifungal
Anti-infective peptides
AntiBP3 Peptipedia CAFPdb dbAMP
standard
No
A 37-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from AntiBP3, Peptipedia, CAFPdb, and other sources, with an available 3D structural model.
Sequence
RIPCQYEDATEDTICQQHCLPKGYSYGICVSYRCSCV
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C179H275N49O58S6
NMFW
C
4233.81
5.38
4
4
11
-1
1.74
-0.300
60.54
Mammalian: 1 hour Yeast: 2 min E.coli: 2 min
6335
1.50
18
Residue Composition
number
1
A
2
R
0
N
2
D
6
C
2
E
3
Q
2
G
1
H
3
I
1
L
1
K
0
M
0
F
2
P
3
S
2
T
0
W
4
Y
2
V
Amino Acid Distribution
A: 1 R: 2 N: 0 D: 2 C: 6 E: 2 Q: 3 G: 2 H: 1 I: 3 L: 1 K: 1 M: 0 F: 0 P: 2 S: 3 T: 2 W: 0 Y: 4 V: 2
Chemical Descriptors
37 reviewed residue count
C179H275N49O58S6 sequence-only estimate (linear, free termini)
4233.81 sequence-only estimate (linear, free termini)
5.38 sequence-only estimate (linear, free termini)
-1 sequence-only estimate (linear, free termini)
1.74 sequence-only estimate (linear, free termini)
-0.300 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb