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Peptide record

TPDB11668

Antibacterial Antifungal standard
37 amino acids
Basic Information
3D PDB MODEL
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TPDB11668
Antibacterial Antifungal
Anti-infective peptides
AntiBP3 Peptipedia CAFPdb
standard
No
A 37-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from AntiBP3, Peptipedia, and CAFPdb, with an available 3D structural model.
Sequence
WPRFPKPRKPTYPGPTYPGPTWPRPTWRRSATIDTEH
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C207H301N59O51
NCQLMV
P
4432.03
11.33
8
2
8
+5
2.88
-1.581
13.24
Mammalian: 2.8 hour Yeast: 3 min E.coli: 2 min
19480
4.40
9
Residue Composition
number
1
A
5
R
0
N
1
D
0
C
1
E
0
Q
2
G
1
H
1
I
0
L
2
K
0
M
1
F
10
P
1
S
6
T
3
W
2
Y
0
V
Amino Acid Distribution
A: 1 R: 5 N: 0 D: 1 C: 0 E: 1 Q: 0 G: 2 H: 1 I: 1 L: 0 K: 2 M: 0 F: 1 P: 10 S: 1 T: 6 W: 3 Y: 2 V: 0
Chemical Descriptors
37 reviewed residue count
C207H301N59O51 sequence-only estimate (linear, free termini)
4432.03 sequence-only estimate (linear, free termini)
11.33 sequence-only estimate (linear, free termini)
+5 sequence-only estimate (linear, free termini)
2.88 sequence-only estimate (linear, free termini)
-1.581 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

CAFPdb