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Peptide record

TPDB11608

Antibacterial Antifungal standard
36 amino acids
Basic Information
3D PDB MODEL
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TPDB11608
Antibacterial Antifungal
Anti-infective peptides
AntiBP3 Peptipedia Antifungipept CAFPdb dbAMP
standard
No
A 36-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from AntiBP3, Peptipedia, Antifungipept, and other sources, with an available 3D structural model.
Sequence
SFGAKNAVKNGLQKLRNQCQANNGQGPFCDIFKKNP
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C170H272N54O50S2
EHMTWY
N
3936.48
10.39
6
1
10
+5
2.15
-0.917
48.89
Mammalian: 1.9 hour Yeast: >20 hour E.coli: >10 hour
125
0.03
13
Residue Composition
number
3
A
1
R
6
N
1
D
2
C
0
E
4
Q
4
G
0
H
1
I
2
L
5
K
0
M
3
F
2
P
1
S
0
T
0
W
0
Y
1
V
Amino Acid Distribution
A: 3 R: 1 N: 6 D: 1 C: 2 E: 0 Q: 4 G: 4 H: 0 I: 1 L: 2 K: 5 M: 0 F: 3 P: 2 S: 1 T: 0 W: 0 Y: 0 V: 1
Chemical Descriptors
36 reviewed residue count
C170H272N54O50S2 sequence-only estimate (linear, free termini)
3936.48 sequence-only estimate (linear, free termini)
10.39 sequence-only estimate (linear, free termini)
+5 sequence-only estimate (linear, free termini)
2.15 sequence-only estimate (linear, free termini)
-0.917 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb Antifungipept