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Peptide record

TPDB11419

Antibacterial Antifungal standard
33 amino acids
Basic Information
3D PDB MODEL
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TPDB11419
Antibacterial Antifungal
Anti-infective peptides
AntiBP3 Peptipedia Antifungipept CAFPdb dbAMP
standard
No
A 33-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from AntiBP3, Peptipedia, Antifungipept, and other sources, with an available 3D structural model.
Sequence
YVPKIPKPQPNKPNFPSFPGHGPFNPHASRFPR
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C178H258N50O41
DCELMTW
P
3754.32
11.59
7
0
8
+5
1.93
-1.185
23.64
Mammalian: 2.8 hour Yeast: 10 min E.coli: 2 min
1490
0.40
7
Residue Composition
number
1
A
2
R
3
N
0
D
0
C
0
E
1
Q
2
G
2
H
1
I
0
L
3
K
0
M
4
F
10
P
2
S
0
T
0
W
1
Y
1
V
Amino Acid Distribution
A: 1 R: 2 N: 3 D: 0 C: 0 E: 0 Q: 1 G: 2 H: 2 I: 1 L: 0 K: 3 M: 0 F: 4 P: 10 S: 2 T: 0 W: 0 Y: 1 V: 1
Chemical Descriptors
33 reviewed residue count
C178H258N50O41 sequence-only estimate (linear, free termini)
3754.32 sequence-only estimate (linear, free termini)
11.59 sequence-only estimate (linear, free termini)
+5 sequence-only estimate (linear, free termini)
1.93 sequence-only estimate (linear, free termini)
-1.185 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb Antifungipept